黄建勋

发布者:王诗铭发布时间:2021-06-27浏览次数:566

教师基本信息

姓名:黄建勋

职称:副研究员

职务:

电子邮箱:huang_ch@fudan.edu.cn

办公地点:复旦大学江湾校区生命科学院G411

办公电话:021-31246698

个人简介

男,2000-2004年就读台湾大学生命科学系,主修植物学,2004年起在台湾大学植物科学研究所为硕博士研究生,2012年获博士学位(中间服兵役),同年在台湾大学任博士后,从事分子遗传学研究植物抗逆基因及相关机制。2013-2016年在复旦大学研究室任博士后,从事系统与进化植物学、生物信息学和基因组学研究;2016聘为复旦大学生物多样性研究所青年副研究员,201812月晋升副研究员,从事系统与进化植物学、生物信息学和基因组学等研究工作。2020年以访问学者身分至美国宾州大学进行合作交流。主持或参与国家自然科学基金重点、面上等科研项目5项,发表SCI收录论文十多篇,其馀论文或著作4篇。


主要研究方向

系统发育学是生物学研究的基石,唯有依赖可靠的系统发育关系才能开展、连结诸多学科之间的发现与结果,并赋与其进化上的意义。植物身为地球上重大的生命体之一,大约有45万种,然则人类对其的关注与了解十分有限,植物系统发育学工作的开展正是为人类开拓认识植物类群进化历史的过程,具有提升人类正视植物多样性的重要意义与深远影响。本课题组基于系统与进化生物学,生物多样性科学,生物信息学,基因组学和分子遗传学等手段,志在揭示重大植物类群的演化历史,连结了生物多样性与形态进化、基因组重复、古地质气候与地理的变化等相关方面的证据,辅以相关基因家族进化的研究,提高科学界对植物扩展的认识与理解。本进化课题组,自2016年以来发表10SCI文章,共影响因子94.41


科研项目

国家自然科学基金委员会,面上项目,31970224,基于核基因的葫芦科系统关系重建和相关进化生物学研究,2020-2023,主持

国家自然科学基金委员会,面上项目,31770242,建构高涵盖度的十字花科系统进化关系并分析花果发育及抗逆基因在不同支系中的进化路线,2018- 2019,主持

国家自然科学基金委员会,面上项目,31670209,基于核基因的蔷薇科系统重建及相关进化生物学研究,2017-2020,参加

国家自然科学基金委员会,重大研究计划,91531301,十字花科植物近缘种环境适应性的系统发育基因组学和分子遗传学研究,2016-2018,参加

中国博士后基金,面上二等资助,2014M551316,利用低拷贝核基因研究十字花科族水平上的系统进化关系,2014-2016,主持


获奖情况

2016年复星奖教金杰出奖

2019年全国高校生命科学类微课教学比赛二等奖


授课情况

上海市精品课程-生命科学导论


招生专业

遗传学(071007)、植物学(071001)、生物化学与分子生物学(071010)


代表性论文和论著

Zhao Y#, Zhang R, Jiang K, Qi J, Hu Y, Guo J, Zhu R, Zhang T, Egan AN, Yi T-S, Huang CH*, Ma H*. 2021. Nuclear phylotranscriptomics/phylogenomics support numerous polyploidization events and hypotheses for the evolution of rhizobial nitrogen-fixing symbiosis in Fabaceae. Mol Plant https://doi.org/10.1016/j.molp.2021.02.006 [SCI; impact factor 12.084]一区,共同通讯

Zhang C#, Huang CH#, Liu M, Hu Y, Panero JL, Luebert F, Gao T, Ma H*. 2021. Phylotranscriptomic insight into Asteraceae diversity, polyploidy, and morphological innovation. J Integra Plant Biol https://doi.org/10.1111/jipb.13078 [SCI; 5-year impact factor 4.061]一区,共同一作

Guo J, Xu W, Hu Y, Huang J, Zhao Y, Zhang L, Huang CH*, Ma H*. 2020. Phylotranscriptomics in Cucurbitaceae reveal multiple whole-genome duplications and key morphological and molecular innovations. Molecular Plant 13: 1117-1133. [SCI; impact factor 12.084] 一区,共同通讯,封面文章

Huang CH*, Qi X, Chen D, Qi J, Ma H*. 2020. Recurrent genome duplication events likely contributed to both the ancient and recent rise of ferns. Journal of Integrative Plant Biology 62: 433-455. [SCI; 5-year impact factor 4.061] 一区,一作兼共同通讯

Yang L, Su D, Chang X, Foster CSP, Sun L, Huang CH, Zhou X, Zeng L, Ma H, Zhong B*. 2020. Phylogenomic insights into deep phylogeny of angiosperms based on broad nuclear gene sampling. Plant Communications 1: 100027. 新期刊

Zhang C, Zhang T, Luebert F, Xiang Y, Huang CH, Hu Y, Rees M, Frohlich MW, Qi J*, Weigend M*, Ma H*. 2020. Asterid phylogenomics/phylotranscriptomics uncover morphological evolutionary histories and support phylogenetic placement for numerous whole-genome duplications. Molecular Biology and Evolutionhttps://doi.org/10.1093/molbev/msaa160(一区,中作)

Li H, Huang CH, Ma H. 2019. Whole-genome duplications in pear and apple. In: Korban S. (eds). The Pear Genome. Compendium of Plant Genomes. Springer, Cham. (书籍著作章节)

Qi X, Kuo L-Y, Guo C, Li H, Li Z, Qi J, Wang L, Hu Y, Xiang J, Zhang C, Guo J, Huang CH* and Ma H*. 2018. A well-resolved fern nuclear phylogeny reveals the evolution history of numerous transcription factor families. Molecular Phylogenetics and Evolution 127: 961-977. [SCI; 5-year impact factor 4.294] (二区, 共同通讯

Xiang YZ#, Huang CH#, Yi H, Wen J, Li S, Yi T, Chen H, Xiang J*, and Hong M*. 2017. Evolution of Rosaceae fruit types based on nuclear phylogeny in the context of geological times and genome duplication. Molecular Biology and Evolution 34: 262-281. [SCI; 5-year impact factor 14.479] (一区,共同一作,封面文章

Huang CH, Zhang C, Liu M, Hu Y, Gao T, Qi J*, and Ma H*. 2016. Multiple polyploidization events across Asteraceae with two nested events in the early history revealed by nuclear phylogenomics. Molecular Biology and Evolution 33: 2820-2835. [SCI; 5-year impact factor 14.479] (一区,一作

Huang CH, Sun R, Hu Y, Zeng L, Zhang N, Cai L, Zhang Q, Koch MA, Al-Shehbaz I, Edger PP, Pires JC, Tan DY, Zhong Y, and Ma H*. 2016. Resolution of Brassicaceae phylogeny using nuclear genes uncovers nested radiations and supports convergent morphological evolution. Molecular Biology and Evolution 33: 394-412. [SCI; 5-year impact factor 14.479] (一区,一作

Zhang Z, Huang CH, Qi J*. 2016. Revealing deep phylogeny of Brassicaceae using composition analysis of low-copy nuclear genes. Biotechnology Bulletin 32: 86-95.

Liu M, Zhang C, Huang CH, Ma H*. 2015. Phylogenetic reconstruction of tribal relationships in Asteroideae (Asteraceae) with low-copy nuclear genes. Chinese Bulletin of Botany 50: 549-564.

Kuo WY, Huang CH, Shih C, Jinn TL*. 2013. Cellular extract preparation for superoxide dismutase (SOD) activity assay. Bio-protocol 3: e811.

Kuo WY, Huang CH, Jinn TL*. 2013. Chaperonin 20 might be an iron chaperone for superoxide dismutase in activating iron superoxide dismutase (FeSOD). Plant Signaling & Behavior 8: e23074.(四区,中作)

Kuo WY#, Huang CH#, Liu AC, Cheng CP, Li SH, Chang WC, Weiss C, Azem A, and Jinn TL*. 2013. CHAPERONIN 20 mediates iron superoxide dismutase (FeSOD) activity independent of its co-chaperonin role in Arabidopsis chloroplasts. New Phytologist 197: 99-110. [SCI; 5-year impact factor 7.833] (一区,共一)

Huang CH, Kuo WY, Jinn TL*. 2012. Models for the mechanism for activating copper-zinc superoxide dismutase in the absence of the CCS Cu chaperone in Arabidopsis. Plant Signaling & Behavior 7: 428-430. (四区,一作)

Huang CH#, Kuo WY#, Weiss C, and Jinn TL*. 2012. Copper chaperone-dependent and -independent activation of three copper-zinc superoxide dismutase homologs localized in different cellular compartments in Arabidopsis. Plant Physiology 158: 737-746. [SCI; 5-year impact factor 6.620] (二区,共同一作)

Wu TH#, Liao MH#, Kuo WY#, Huang CH#, Hsieh HL#, and Jinn TL*. 2011. Characterization of copper/zinc and manganese superoxide dismutase in green bamboo (Bambusa oldhamii): cloning, expression and regulation. Plant Physiology and Biochemistry 49: 195-200. [SCI; 5-year impact factor 3.217] 区,共同一作)